Polyamine-Functionalized 2閳?Amino-LNA in Oligonucleotides: Facile Synthesis of New Monomers and High-Affinity Binding towards ssDNA and dsDNA was written by Danielsen, Mathias B.;Christensen, Niels Johan;Joergensen, Per T.;Jensen, Knud J.;Wengel, Jesper;Lou, Chenguang. And the article was included in Chemistry – A European Journal in 2021.Recommanded Product: 954-81-4 This article mentions the following:
Attachment of cationic moieties to oligonucleotides (ONs) promises not only to increase the binding affinity of antisense ONs by reducing charge repulsion between the two neg. charged strands of a duplex, but also to augment their in vivo stability against nucleases. In this study, polyamine functionality was introduced into ONs by means of 2閳?amino-LNA scaffolds. The resulting ONs exhibited efficient binding towards ssDNA, ssRNA and dsDNA targets, and the 2閳?amino-LNA analog carrying a tri-aminated linker showed the most pronounced duplex- and triplex-stabilizing effect. Mol. modeling revealed that favorable conformational and electrostatic effects led to salt-bridge formation between pos. charged polyamine moieties and the Watson-Hoogsteen groove of the dsDNA targets, resulting in the observed triplex stabilization. All the investigated monomers showed increased resistance against 3閳?nucleolytic digestion relative to the non-functionalized controls. In the experiment, the researchers used many compounds, for example, N-(5-Bromopentyl)phthalimide (cas: 954-81-4Recommanded Product: 954-81-4).
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Referemce:
Bromide – Wikipedia,
bromide – Wiktionary